The Metabolite class
Metabolite-class.Rd
The Metabolite object is a representation of metabolomic data, metabolomic annotation, and sample annotation.
Slots
assayData
a data.frame or data.table of metabolite measurements (peak area data or normalized data, sample [row] * feature [column]).
featureData
a data.frame or data.table of metabolite annotation (chemical annotation)
sampleData
a data.frame or data.table of sample annotation (sample meta data).
featureID
a character of the metabolite ID column (in feature file and the column names of data), default: CHEM_ID (provided from Metabolon file).
sampleID
a character of the sample ID column (in sample and the first column of data), default: PARENT_SAMPLE_NAME (provided from Metabolon file).
logs
Log information of data analysis process.
miscData
Ancillary data.
See also
Metabolite
, load_excel
, load_data